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Cluster: Rep_3356_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_3356_c_25 Rep_3356_c_25_6 8913 10388 + 9.B.34.1.2
TC Rep_3356_c_25 Rep_3356_c_25_7 10533 14525 + 9.B.34.1.2
NULL(UNKNOWN) Rep_3356_c_25 Rep_3356_c_25_8 14550 14948 + NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_3356_c_25 Rep_3356_c_25_9 15046 15840 - 2.A.5.5.2
pfam Rep_3356_c_25 Rep_3356_c_25_10 16091 17290 + Lactamase_B | Lactamase_B_2 | ODP
TC Rep_3356_c_25 Rep_3356_c_25_11 17490 18680 + 3.A.1.4.10
TC Rep_3356_c_25 Rep_3356_c_25_12 18919 19794 + 3.A.1.4.10
TC Rep_3356_c_25 Rep_3356_c_25_13 19805 20809 + 3.A.1.4.8
TC Rep_3356_c_25 Rep_3356_c_25_14 20812 21570 + 3.A.1.4.10
TC Rep_3356_c_25 Rep_3356_c_25_15 21586 22296 + 3.A.1.4.10
TC Rep_3356_c_25 Rep_3356_c_25_16 22312 22932 + 2.A.115.2.14
pfam Rep_3356_c_25 Rep_3356_c_25_17 23712 25253 + SipL | SipL
pfam Rep_3356_c_25 Rep_3356_c_25_18 25270 26748 + SpoIVA_ATPase | SpoIVA_middle | SpoIVA_C
CAZyme Rep_3356_c_25 Rep_3356_c_25_19 27055 28860 + GH13_36
Gene ID: Rep_3356_c_25_6
Type: TC
Location: 8913 - 10388 (+)
Gene ID: Rep_3356_c_25_7
Type: TC
Location: 10533 - 14525 (+)
Gene ID: Rep_3356_c_25_8
Type:
Location: 14550 - 14948 (+)
Gene ID: Rep_3356_c_25_9
Type: TC
Location: 15046 - 15840 (-)
Gene ID: Rep_3356_c_25_10
Type: pfam
Location: 16091 - 17290 (+)
Gene ID: Rep_3356_c_25_11
Type: TC
Location: 17490 - 18680 (+)
Gene ID: Rep_3356_c_25_12
Type: TC
Location: 18919 - 19794 (+)
Gene ID: Rep_3356_c_25_13
Type: TC
Location: 19805 - 20809 (+)
Gene ID: Rep_3356_c_25_14
Type: TC
Location: 20812 - 21570 (+)
Gene ID: Rep_3356_c_25_15
Type: TC
Location: 21586 - 22296 (+)
Gene ID: Rep_3356_c_25_16
Type: TC
Location: 22312 - 22932 (+)
Gene ID: Rep_3356_c_25_17
Type: pfam
Location: 23712 - 25253 (+)
Gene ID: Rep_3356_c_25_18
Type: pfam
Location: 25270 - 26748 (+)
Gene ID: Rep_3356_c_25_19
Type: CAZyme
Location: 27055 - 28860 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Oscillospirales
→
Family
Acutalibacteraceae
→
Genus
Scatavimonas
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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