Cluster: Rep_3356_CGC7
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3356
- CGC Family ID: CGCFAM_00418
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3356_c_23 | Rep_3356_c_23_42 | 49689 | 51419 | + | 3.A.1.135.5 |
| TC | Rep_3356_c_23 | Rep_3356_c_23_43 | 51416 | 53155 | + | 3.A.1.135.7 |
| pfam | Rep_3356_c_23 | Rep_3356_c_23_44 | 53437 | 55197 | + | Collagen | Collagen | Collagen | BclA_C |
| CAZyme | Rep_3356_c_23 | Rep_3356_c_23_45 | 55301 | 56380 | + | GT2 |
Gene ID: Rep_3356_c_23_42
Type: TC
Location: 49689 - 51419 (+)
Type: TC
Location: 49689 - 51419 (+)
Gene ID: Rep_3356_c_23_43
Type: TC
Location: 51416 - 53155 (+)
Type: TC
Location: 51416 - 53155 (+)
Gene ID: Rep_3356_c_23_44
Type: pfam
Location: 53437 - 55197 (+)
Type: pfam
Location: 53437 - 55197 (+)
Gene ID: Rep_3356_c_23_45
Type: CAZyme
Location: 55301 - 56380 (+)
Type: CAZyme
Location: 55301 - 56380 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Scatavimonas
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.