Cluster: Rep_3356_CGC6
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3356
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3356_c_22 | Rep_3356_c_22_23 | 21863 | 22456 | + | 9.B.156.3.1 |
| TC | Rep_3356_c_22 | Rep_3356_c_22_24 | 22460 | 22981 | + | 9.B.156.3.1 |
| TC | Rep_3356_c_22 | Rep_3356_c_22_25 | 22984 | 24384 | - | 9.A.11.1.1 |
| STP | Rep_3356_c_22 | Rep_3356_c_22_26 | 24869 | 26248 | + | PALP |
| pfam | Rep_3356_c_22 | Rep_3356_c_22_27 | 26352 | 26900 | - | Amidase_3 |
| CAZyme | Rep_3356_c_22 | Rep_3356_c_22_28 | 26970 | 27854 | - | CE4 |
Gene ID: Rep_3356_c_22_23
Type: TC
Location: 21863 - 22456 (+)
Type: TC
Location: 21863 - 22456 (+)
Gene ID: Rep_3356_c_22_24
Type: TC
Location: 22460 - 22981 (+)
Type: TC
Location: 22460 - 22981 (+)
Gene ID: Rep_3356_c_22_25
Type: TC
Location: 22984 - 24384 (-)
Type: TC
Location: 22984 - 24384 (-)
Gene ID: Rep_3356_c_22_26
Type: STP
Location: 24869 - 26248 (+)
Type: STP
Location: 24869 - 26248 (+)
Gene ID: Rep_3356_c_22_27
Type: pfam
Location: 26352 - 26900 (-)
Type: pfam
Location: 26352 - 26900 (-)
Gene ID: Rep_3356_c_22_28
Type: CAZyme
Location: 26970 - 27854 (-)
Type: CAZyme
Location: 26970 - 27854 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Scatavimonas
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.