Cluster: Rep_3356_CGC27
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3356
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3356_c_69 | Rep_3356_c_69_41 | 35763 | 36521 | - | 3.A.1.134.4 |
| STP | Rep_3356_c_69 | Rep_3356_c_69_42 | 36544 | 37128 | - | TetR_N |
| CAZyme | Rep_3356_c_69 | Rep_3356_c_69_43 | 38088 | 39689 | + | CBM13 |
| pfam | Rep_3356_c_69 | Rep_3356_c_69_44 | 39842 | 40759 | - | SUFBD_core |
| TC | Rep_3356_c_69 | Rep_3356_c_69_45 | 40756 | 41484 | - | 3.A.1.114.1 |
| TC | Rep_3356_c_69 | Rep_3356_c_69_46 | 41512 | 43374 | - | 3.A.3.6.10 |
Gene ID: Rep_3356_c_69_41
Type: TC
Location: 35763 - 36521 (-)
Type: TC
Location: 35763 - 36521 (-)
Gene ID: Rep_3356_c_69_42
Type: STP
Location: 36544 - 37128 (-)
Type: STP
Location: 36544 - 37128 (-)
Gene ID: Rep_3356_c_69_43
Type: CAZyme
Location: 38088 - 39689 (+)
Type: CAZyme
Location: 38088 - 39689 (+)
Gene ID: Rep_3356_c_69_44
Type: pfam
Location: 39842 - 40759 (-)
Type: pfam
Location: 39842 - 40759 (-)
Gene ID: Rep_3356_c_69_45
Type: TC
Location: 40756 - 41484 (-)
Type: TC
Location: 40756 - 41484 (-)
Gene ID: Rep_3356_c_69_46
Type: TC
Location: 41512 - 43374 (-)
Type: TC
Location: 41512 - 43374 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Scatavimonas
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.