Cluster: Rep_3356_CGC20
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_3356
- CGC Family ID: CGCFAM_02237
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3356_c_53 | Rep_3356_c_53_76 | 72992 | 73972 | - | GT2 |
| TC | Rep_3356_c_53 | Rep_3356_c_53_77 | 73979 | 75127 | - | 4.D.2.1.7 |
| peptidase | Rep_3356_c_53 | Rep_3356_c_53_78 | 75312 | 76604 | - | I04.UPW |
| CAZyme | Rep_3356_c_53 | Rep_3356_c_53_79 | 76601 | 77971 | - | GT28 |
| pfam | Rep_3356_c_53 | Rep_3356_c_53_80 | 78303 | 80249 | + | VanW |
| TC | Rep_3356_c_53 | Rep_3356_c_53_81 | 80441 | 81448 | + | 9.A.11.1.1 |
Gene ID: Rep_3356_c_53_76
Type: CAZyme
Location: 72992 - 73972 (-)
Type: CAZyme
Location: 72992 - 73972 (-)
Gene ID: Rep_3356_c_53_77
Type: TC
Location: 73979 - 75127 (-)
Type: TC
Location: 73979 - 75127 (-)
Gene ID: Rep_3356_c_53_78
Type: peptidase
Location: 75312 - 76604 (-)
Type: peptidase
Location: 75312 - 76604 (-)
Gene ID: Rep_3356_c_53_79
Type: CAZyme
Location: 76601 - 77971 (-)
Type: CAZyme
Location: 76601 - 77971 (-)
Gene ID: Rep_3356_c_53_80
Type: pfam
Location: 78303 - 80249 (+)
Type: pfam
Location: 78303 - 80249 (+)
Gene ID: Rep_3356_c_53_81
Type: TC
Location: 80441 - 81448 (+)
Type: TC
Location: 80441 - 81448 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Scatavimonas
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.