Cluster: Rep_3356_CGC17
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_3356
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3356_c_45 | Rep_3356_c_45_19 | 20945 | 23941 | - | GH13_14 |
| CAZyme | Rep_3356_c_45 | Rep_3356_c_45_20 | 24012 | 26273 | - | GH13_14 |
| NULL(UNKNOWN) | Rep_3356_c_45 | Rep_3356_c_45_21 | 26545 | 26838 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | Rep_3356_c_45 | Rep_3356_c_45_22 | 27165 | 27416 | - | Ribosomal_S18 |
| TC | Rep_3356_c_45 | Rep_3356_c_45_23 | 27465 | 27911 | - | 3.A.7.19.1 |
| pfam | Rep_3356_c_45 | Rep_3356_c_45_24 | 27949 | 28242 | - | Ribosomal_S6 |
| TC | Rep_3356_c_45 | Rep_3356_c_45_25 | 28384 | 29259 | - | 2.A.115.1.5 |
Gene ID: Rep_3356_c_45_19
Type: CAZyme
Location: 20945 - 23941 (-)
Type: CAZyme
Location: 20945 - 23941 (-)
Gene ID: Rep_3356_c_45_20
Type: CAZyme
Location: 24012 - 26273 (-)
Type: CAZyme
Location: 24012 - 26273 (-)
Gene ID: Rep_3356_c_45_21
Type:
Location: 26545 - 26838 (+)
Type:
Location: 26545 - 26838 (+)
Gene ID: Rep_3356_c_45_22
Type: pfam
Location: 27165 - 27416 (-)
Type: pfam
Location: 27165 - 27416 (-)
Gene ID: Rep_3356_c_45_23
Type: TC
Location: 27465 - 27911 (-)
Type: TC
Location: 27465 - 27911 (-)
Gene ID: Rep_3356_c_45_24
Type: pfam
Location: 27949 - 28242 (-)
Type: pfam
Location: 27949 - 28242 (-)
Gene ID: Rep_3356_c_45_25
Type: TC
Location: 28384 - 29259 (-)
Type: TC
Location: 28384 - 29259 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Scatavimonas
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.