Cluster: Rep_3356_CGC15
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3356
- CGC Family ID: CGCFAM_07082
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3356_c_35 | Rep_3356_c_35_21 | 22961 | 24454 | + | 3.A.1.1.27 |
| TC | Rep_3356_c_35 | Rep_3356_c_35_22 | 24451 | 25305 | + | 3.A.1.1.27 |
| CAZyme | Rep_3356_c_35 | Rep_3356_c_35_23 | 25383 | 27020 | + | GH13_36 |
| pfam | Rep_3356_c_35 | Rep_3356_c_35_24 | 27091 | 28140 | + | BtrH_N |
| pfam | Rep_3356_c_35 | Rep_3356_c_35_25 | 28349 | 29047 | - | DNA_alkylation |
| TC | Rep_3356_c_35 | Rep_3356_c_35_26 | 29343 | 29996 | + | 9.B.18.1.3 |
Gene ID: Rep_3356_c_35_21
Type: TC
Location: 22961 - 24454 (+)
Type: TC
Location: 22961 - 24454 (+)
Gene ID: Rep_3356_c_35_22
Type: TC
Location: 24451 - 25305 (+)
Type: TC
Location: 24451 - 25305 (+)
Gene ID: Rep_3356_c_35_23
Type: CAZyme
Location: 25383 - 27020 (+)
Type: CAZyme
Location: 25383 - 27020 (+)
Gene ID: Rep_3356_c_35_24
Type: pfam
Location: 27091 - 28140 (+)
Type: pfam
Location: 27091 - 28140 (+)
Gene ID: Rep_3356_c_35_25
Type: pfam
Location: 28349 - 29047 (-)
Type: pfam
Location: 28349 - 29047 (-)
Gene ID: Rep_3356_c_35_26
Type: TC
Location: 29343 - 29996 (+)
Type: TC
Location: 29343 - 29996 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Scatavimonas
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.