Cluster: Rep_3356_CGC11
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3356
- CGC Family ID: CGCFAM_10865
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3356_c_29 | Rep_3356_c_29_10 | 10993 | 11721 | - | 3.A.1.103.1 |
| pfam | Rep_3356_c_29 | Rep_3356_c_29_11 | 11755 | 12573 | - | ABC2_membrane |
| CAZyme | Rep_3356_c_29 | Rep_3356_c_29_12 | 12785 | 16621 | - | CBM26 | GH13_19 |
| NULL(UNKNOWN) | Rep_3356_c_29 | Rep_3356_c_29_13 | 16861 | 18432 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_3356_c_29 | Rep_3356_c_29_14 | 18425 | 19132 | - | 3.A.1.147.2 |
Gene ID: Rep_3356_c_29_10
Type: TC
Location: 10993 - 11721 (-)
Type: TC
Location: 10993 - 11721 (-)
Gene ID: Rep_3356_c_29_11
Type: pfam
Location: 11755 - 12573 (-)
Type: pfam
Location: 11755 - 12573 (-)
Gene ID: Rep_3356_c_29_12
Type: CAZyme
Location: 12785 - 16621 (-)
Type: CAZyme
Location: 12785 - 16621 (-)
Gene ID: Rep_3356_c_29_13
Type:
Location: 16861 - 18432 (-)
Type:
Location: 16861 - 18432 (-)
Gene ID: Rep_3356_c_29_14
Type: TC
Location: 18425 - 19132 (-)
Type: TC
Location: 18425 - 19132 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Scatavimonas
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.