Cluster: Rep_3356_CGC1
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3356
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3356_c_1 | Rep_3356_c_1_7 | 6291 | 7262 | - | 2.A.58.2.2 |
| CAZyme | Rep_3356_c_1 | Rep_3356_c_1_8 | 7468 | 8088 | + | CBM50 |
| TF | Rep_3356_c_1 | Rep_3356_c_1_9 | 8156 | 8428 | - | HTH_3 |
| NULL(UNKNOWN) | Rep_3356_c_1 | Rep_3356_c_1_10 | 8531 | 8845 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_3356_c_1 | Rep_3356_c_1_11 | 9732 | 12425 | + | 3.A.3.4.1 |
| TC | Rep_3356_c_1 | Rep_3356_c_1_12 | 12612 | 13244 | - | 3.A.1.122.8 |
Gene ID: Rep_3356_c_1_7
Type: TC
Location: 6291 - 7262 (-)
Type: TC
Location: 6291 - 7262 (-)
Gene ID: Rep_3356_c_1_8
Type: CAZyme
Location: 7468 - 8088 (+)
Type: CAZyme
Location: 7468 - 8088 (+)
Gene ID: Rep_3356_c_1_9
Type: TF
Location: 8156 - 8428 (-)
Type: TF
Location: 8156 - 8428 (-)
Gene ID: Rep_3356_c_1_10
Type:
Location: 8531 - 8845 (+)
Type:
Location: 8531 - 8845 (+)
Gene ID: Rep_3356_c_1_11
Type: TC
Location: 9732 - 12425 (+)
Type: TC
Location: 9732 - 12425 (+)
Gene ID: Rep_3356_c_1_12
Type: TC
Location: 12612 - 13244 (-)
Type: TC
Location: 12612 - 13244 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Scatavimonas
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.