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Cluster: Rep_3355_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_3355_c_11 Rep_3355_c_11_37 31008 31709 + 3.A.1.4.6
TC Rep_3355_c_11 Rep_3355_c_11_38 31745 32611 + 3.A.1.4.3
TC Rep_3355_c_11 Rep_3355_c_11_39 32625 33491 + 3.A.1.4.8
TC Rep_3355_c_11 Rep_3355_c_11_40 33504 34280 + 3.A.1.4.8
pfam Rep_3355_c_11 Rep_3355_c_11_41 34309 35457 + ANF_receptor | Peripla_BP_5 | Peripla_BP_6
TF Rep_3355_c_11 Rep_3355_c_11_42 35721 36761 - LacI
CAZyme Rep_3355_c_11 Rep_3355_c_11_43 37101 37889 + CBM21 | CBM21
Gene ID: Rep_3355_c_11_37
Type: TC
Location: 31008 - 31709 (+)
Gene ID: Rep_3355_c_11_38
Type: TC
Location: 31745 - 32611 (+)
Gene ID: Rep_3355_c_11_39
Type: TC
Location: 32625 - 33491 (+)
Gene ID: Rep_3355_c_11_40
Type: TC
Location: 33504 - 34280 (+)
Gene ID: Rep_3355_c_11_41
Type: pfam
Location: 34309 - 35457 (+)
Gene ID: Rep_3355_c_11_42
Type: TF
Location: 35721 - 36761 (-)
Gene ID: Rep_3355_c_11_43
Type: CAZyme
Location: 37101 - 37889 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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