Cluster: Rep_3355_CGC6
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3355
- CGC Family ID: CGCFAM_06333
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3355_c_10 | Rep_3355_c_10_3 | 3324 | 6005 | + | 3.A.3.2.21 |
| pfam | Rep_3355_c_10 | Rep_3355_c_10_4 | 6208 | 6396 | - | DUF3788 |
| pfam | Rep_3355_c_10 | Rep_3355_c_10_5 | 6924 | 7499 | + | ECF-ribofla_trS |
| TC | Rep_3355_c_10 | Rep_3355_c_10_6 | 7707 | 9362 | + | 2.A.58.2.2 |
| NULL(UNKNOWN) | Rep_3355_c_10 | Rep_3355_c_10_7 | 9591 | 10103 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_3355_c_10 | Rep_3355_c_10_8 | 9987 | 12158 | - | GH13_36 |
Gene ID: Rep_3355_c_10_3
Type: TC
Location: 3324 - 6005 (+)
Type: TC
Location: 3324 - 6005 (+)
Gene ID: Rep_3355_c_10_4
Type: pfam
Location: 6208 - 6396 (-)
Type: pfam
Location: 6208 - 6396 (-)
Gene ID: Rep_3355_c_10_5
Type: pfam
Location: 6924 - 7499 (+)
Type: pfam
Location: 6924 - 7499 (+)
Gene ID: Rep_3355_c_10_6
Type: TC
Location: 7707 - 9362 (+)
Type: TC
Location: 7707 - 9362 (+)
Gene ID: Rep_3355_c_10_7
Type:
Location: 9591 - 10103 (+)
Type:
Location: 9591 - 10103 (+)
Gene ID: Rep_3355_c_10_8
Type: CAZyme
Location: 9987 - 12158 (-)
Type: CAZyme
Location: 9987 - 12158 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Scatavimonas
Species
Scatavimonas sp900540865
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.