Cluster: Rep_3355_CGC20
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_3355
- CGC Family ID: CGCFAM_01561
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3355_c_31 | Rep_3355_c_31_3 | 1306 | 2631 | + | 3.B.1.1.2 |
| TC | Rep_3355_c_31 | Rep_3355_c_31_4 | 2687 | 3058 | + | 3.B.1.1.3 |
| TC | Rep_3355_c_31 | Rep_3355_c_31_5 | 3104 | 4504 | + | 3.B.1.1.6 |
| CAZyme | Rep_3355_c_31 | Rep_3355_c_31_6 | 4980 | 7814 | + | CBM26 |
| pfam | Rep_3355_c_31 | Rep_3355_c_31_7 | 7804 | 8799 | + | Dockerin_1 |
| sulfatase | Rep_3355_c_31 | Rep_3355_c_31_8 | 8949 | 9989 | + | S1_16 |
| CAZyme | Rep_3355_c_31 | Rep_3355_c_31_9 | 10142 | 12364 | + | GH36 |
Gene ID: Rep_3355_c_31_3
Type: TC
Location: 1306 - 2631 (+)
Type: TC
Location: 1306 - 2631 (+)
Gene ID: Rep_3355_c_31_4
Type: TC
Location: 2687 - 3058 (+)
Type: TC
Location: 2687 - 3058 (+)
Gene ID: Rep_3355_c_31_5
Type: TC
Location: 3104 - 4504 (+)
Type: TC
Location: 3104 - 4504 (+)
Gene ID: Rep_3355_c_31_6
Type: CAZyme
Location: 4980 - 7814 (+)
Type: CAZyme
Location: 4980 - 7814 (+)
Gene ID: Rep_3355_c_31_7
Type: pfam
Location: 7804 - 8799 (+)
Type: pfam
Location: 7804 - 8799 (+)
Gene ID: Rep_3355_c_31_8
Type: sulfatase
Location: 8949 - 9989 (+)
Type: sulfatase
Location: 8949 - 9989 (+)
Gene ID: Rep_3355_c_31_9
Type: CAZyme
Location: 10142 - 12364 (+)
Type: CAZyme
Location: 10142 - 12364 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Scatavimonas
Species
Scatavimonas sp900540865
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.