Cluster: Rep_3355_CGC17
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3355
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3355_c_22 | Rep_3355_c_22_13 | 14642 | 16021 | + | GH4 |
| TF | Rep_3355_c_22 | Rep_3355_c_22_14 | 16123 | 16917 | + | HTH_DeoR |
| TC | Rep_3355_c_22 | Rep_3355_c_22_15 | 16980 | 18323 | + | 3.A.1.1.20 |
| TC | Rep_3355_c_22 | Rep_3355_c_22_16 | 18442 | 19371 | + | 3.A.1.1.21 |
| TC | Rep_3355_c_22 | Rep_3355_c_22_17 | 19368 | 20225 | + | 3.A.1.1.17 |
Gene ID: Rep_3355_c_22_13
Type: CAZyme
Location: 14642 - 16021 (+)
Type: CAZyme
Location: 14642 - 16021 (+)
Gene ID: Rep_3355_c_22_14
Type: TF
Location: 16123 - 16917 (+)
Type: TF
Location: 16123 - 16917 (+)
Gene ID: Rep_3355_c_22_15
Type: TC
Location: 16980 - 18323 (+)
Type: TC
Location: 16980 - 18323 (+)
Gene ID: Rep_3355_c_22_16
Type: TC
Location: 18442 - 19371 (+)
Type: TC
Location: 18442 - 19371 (+)
Gene ID: Rep_3355_c_22_17
Type: TC
Location: 19368 - 20225 (+)
Type: TC
Location: 19368 - 20225 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Scatavimonas
Species
Scatavimonas sp900540865
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.