Cluster: Rep_3355_CGC14
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3355
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3355_c_18 | Rep_3355_c_18_5 | 5547 | 7040 | + | 3.A.1.1.27 |
| TC | Rep_3355_c_18 | Rep_3355_c_18_6 | 7037 | 7891 | + | 3.A.1.1.27 |
| CAZyme | Rep_3355_c_18 | Rep_3355_c_18_7 | 7970 | 9607 | + | GH13_36 |
| pfam | Rep_3355_c_18 | Rep_3355_c_18_8 | 9705 | 10406 | - | DNA_alkylation |
| TC | Rep_3355_c_18 | Rep_3355_c_18_9 | 10704 | 11360 | + | 9.B.18.1.3 |
Gene ID: Rep_3355_c_18_5
Type: TC
Location: 5547 - 7040 (+)
Type: TC
Location: 5547 - 7040 (+)
Gene ID: Rep_3355_c_18_6
Type: TC
Location: 7037 - 7891 (+)
Type: TC
Location: 7037 - 7891 (+)
Gene ID: Rep_3355_c_18_7
Type: CAZyme
Location: 7970 - 9607 (+)
Type: CAZyme
Location: 7970 - 9607 (+)
Gene ID: Rep_3355_c_18_8
Type: pfam
Location: 9705 - 10406 (-)
Type: pfam
Location: 9705 - 10406 (-)
Gene ID: Rep_3355_c_18_9
Type: TC
Location: 10704 - 11360 (+)
Type: TC
Location: 10704 - 11360 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Scatavimonas
Species
Scatavimonas sp900540865
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.