Cluster: Rep_3355_CGC10
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3355
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3355_c_13 | Rep_3355_c_13_9 | 5859 | 6593 | + | 3.A.1.105.14 |
| pfam | Rep_3355_c_13 | Rep_3355_c_13_10 | 6580 | 7323 | + | ABC2_membrane | ABC2_membrane_3 |
| pfam | Rep_3355_c_13 | Rep_3355_c_13_11 | 7444 | 7791 | - | Amidase_3 |
| CAZyme | Rep_3355_c_13 | Rep_3355_c_13_12 | 8169 | 10961 | - | CBM26 | CBM26 | GH13_28 |
Gene ID: Rep_3355_c_13_9
Type: TC
Location: 5859 - 6593 (+)
Type: TC
Location: 5859 - 6593 (+)
Gene ID: Rep_3355_c_13_10
Type: pfam
Location: 6580 - 7323 (+)
Type: pfam
Location: 6580 - 7323 (+)
Gene ID: Rep_3355_c_13_11
Type: pfam
Location: 7444 - 7791 (-)
Type: pfam
Location: 7444 - 7791 (-)
Gene ID: Rep_3355_c_13_12
Type: CAZyme
Location: 8169 - 10961 (-)
Type: CAZyme
Location: 8169 - 10961 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Scatavimonas
Species
Scatavimonas sp900540865
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.