Cluster: Rep_3353_CGC8
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3353
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3353_c_12 | Rep_3353_c_12_9 | 6507 | 8012 | + | GH25 |
| TC | Rep_3353_c_12 | Rep_3353_c_12_10 | 8323 | 8820 | + | 3.D.1.5.1 |
| STP | Rep_3353_c_12 | Rep_3353_c_12_11 | 8823 | 9395 | + | HATPase_c |
| NULL(UNKNOWN) | Rep_3353_c_12 | Rep_3353_c_12_12 | 9379 | 9747 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_3353_c_12 | Rep_3353_c_12_13 | 9762 | 11549 | + | 3.D.1.5.1 |
| TC | Rep_3353_c_12 | Rep_3353_c_12_14 | 11566 | 13308 | + | 3.D.1.5.1 |
Gene ID: Rep_3353_c_12_9
Type: CAZyme
Location: 6507 - 8012 (+)
Type: CAZyme
Location: 6507 - 8012 (+)
Gene ID: Rep_3353_c_12_10
Type: TC
Location: 8323 - 8820 (+)
Type: TC
Location: 8323 - 8820 (+)
Gene ID: Rep_3353_c_12_11
Type: STP
Location: 8823 - 9395 (+)
Type: STP
Location: 8823 - 9395 (+)
Gene ID: Rep_3353_c_12_12
Type:
Location: 9379 - 9747 (+)
Type:
Location: 9379 - 9747 (+)
Gene ID: Rep_3353_c_12_13
Type: TC
Location: 9762 - 11549 (+)
Type: TC
Location: 9762 - 11549 (+)
Gene ID: Rep_3353_c_12_14
Type: TC
Location: 11566 - 13308 (+)
Type: TC
Location: 11566 - 13308 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Scatavimonas
Species
Scatavimonas merdipullorum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.