Cluster: Rep_3353_CGC7
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3353
- CGC Family ID: CGCFAM_10258
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3353_c_11 | Rep_3353_c_11_39 | 34707 | 37349 | - | CBM13 | CBM13 |
| STP | Rep_3353_c_11 | Rep_3353_c_11_40 | 38006 | 38587 | + | Pribosyltran |
| pfam | Rep_3353_c_11 | Rep_3353_c_11_41 | 38707 | 39414 | + | RadC |
| TC | Rep_3353_c_11 | Rep_3353_c_11_42 | 39524 | 41308 | - | 3.A.1.135.9 |
| TC | Rep_3353_c_11 | Rep_3353_c_11_43 | 41305 | 43041 | - | 3.A.1.135.9 |
Gene ID: Rep_3353_c_11_39
Type: CAZyme
Location: 34707 - 37349 (-)
Type: CAZyme
Location: 34707 - 37349 (-)
Gene ID: Rep_3353_c_11_40
Type: STP
Location: 38006 - 38587 (+)
Type: STP
Location: 38006 - 38587 (+)
Gene ID: Rep_3353_c_11_41
Type: pfam
Location: 38707 - 39414 (+)
Type: pfam
Location: 38707 - 39414 (+)
Gene ID: Rep_3353_c_11_42
Type: TC
Location: 39524 - 41308 (-)
Type: TC
Location: 39524 - 41308 (-)
Gene ID: Rep_3353_c_11_43
Type: TC
Location: 41305 - 43041 (-)
Type: TC
Location: 41305 - 43041 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Scatavimonas
Species
Scatavimonas merdipullorum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.