Cluster: Rep_3353_CGC4
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3353
- CGC Family ID: CGCFAM_02236
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3353_c_7 | Rep_3353_c_7_4 | 4347 | 5147 | - | CE4 |
| pfam | Rep_3353_c_7 | Rep_3353_c_7_5 | 5204 | 6460 | - | T2SSF | T2SSF |
| TC | Rep_3353_c_7 | Rep_3353_c_7_6 | 6467 | 7561 | - | 3.A.15.2.1 |
| TC | Rep_3353_c_7 | Rep_3353_c_7_7 | 7580 | 9271 | - | 3.A.11.1.3 |
Gene ID: Rep_3353_c_7_4
Type: CAZyme
Location: 4347 - 5147 (-)
Type: CAZyme
Location: 4347 - 5147 (-)
Gene ID: Rep_3353_c_7_5
Type: pfam
Location: 5204 - 6460 (-)
Type: pfam
Location: 5204 - 6460 (-)
Gene ID: Rep_3353_c_7_6
Type: TC
Location: 6467 - 7561 (-)
Type: TC
Location: 6467 - 7561 (-)
Gene ID: Rep_3353_c_7_7
Type: TC
Location: 7580 - 9271 (-)
Type: TC
Location: 7580 - 9271 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Scatavimonas
Species
Scatavimonas merdipullorum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.