Cluster: Rep_3353_CGC20
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate:
- Genome ID: Rep_3353
- CGC Family ID: CGCFAM_00005
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3353_c_35 | Rep_3353_c_35_26 | 34301 | 35296 | - | GT2 |
| CAZyme | Rep_3353_c_35 | Rep_3353_c_35_27 | 35293 | 36519 | - | GT4 |
| pfam | Rep_3353_c_35 | Rep_3353_c_35_28 | 36535 | 37758 | - | Wzy_C |
| pfam | Rep_3353_c_35 | Rep_3353_c_35_29 | 37770 | 38069 | - | Acyl_transf_3 |
| CAZyme | Rep_3353_c_35 | Rep_3353_c_35_30 | 38076 | 39062 | - | GT8 |
| TC | Rep_3353_c_35 | Rep_3353_c_35_31 | 39083 | 39790 | - | 9.B.18.1.3 |
| TC | Rep_3353_c_35 | Rep_3353_c_35_32 | 39891 | 40583 | - | 8.A.3.1.2 |
Gene ID: Rep_3353_c_35_26
Type: CAZyme
Location: 34301 - 35296 (-)
Type: CAZyme
Location: 34301 - 35296 (-)
Gene ID: Rep_3353_c_35_27
Type: CAZyme
Location: 35293 - 36519 (-)
Type: CAZyme
Location: 35293 - 36519 (-)
Gene ID: Rep_3353_c_35_28
Type: pfam
Location: 36535 - 37758 (-)
Type: pfam
Location: 36535 - 37758 (-)
Gene ID: Rep_3353_c_35_29
Type: pfam
Location: 37770 - 38069 (-)
Type: pfam
Location: 37770 - 38069 (-)
Gene ID: Rep_3353_c_35_30
Type: CAZyme
Location: 38076 - 39062 (-)
Type: CAZyme
Location: 38076 - 39062 (-)
Gene ID: Rep_3353_c_35_31
Type: TC
Location: 39083 - 39790 (-)
Type: TC
Location: 39083 - 39790 (-)
Gene ID: Rep_3353_c_35_32
Type: TC
Location: 39891 - 40583 (-)
Type: TC
Location: 39891 - 40583 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Scatavimonas
Species
Scatavimonas merdipullorum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.