Cluster: Rep_3353_CGC2
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3353
- CGC Family ID: CGCFAM_10627
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3353_c_6 | Rep_3353_c_6_8 | 10546 | 12294 | + | 2.A.58.2.2 |
| TC | Rep_3353_c_6 | Rep_3353_c_6_9 | 12346 | 12912 | - | 2.A.107.1.2 |
| CAZyme | Rep_3353_c_6 | Rep_3353_c_6_10 | 13370 | 15568 | + | CBM26 | GH13_28 |
Gene ID: Rep_3353_c_6_8
Type: TC
Location: 10546 - 12294 (+)
Type: TC
Location: 10546 - 12294 (+)
Gene ID: Rep_3353_c_6_9
Type: TC
Location: 12346 - 12912 (-)
Type: TC
Location: 12346 - 12912 (-)
Gene ID: Rep_3353_c_6_10
Type: CAZyme
Location: 13370 - 15568 (+)
Type: CAZyme
Location: 13370 - 15568 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Scatavimonas
Species
Scatavimonas merdipullorum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.