Cluster: Rep_3353_CGC17
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_3353
- CGC Family ID: CGCFAM_02237
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3353_c_31 | Rep_3353_c_31_4 | 3901 | 4878 | - | GT2 |
| TC | Rep_3353_c_31 | Rep_3353_c_31_5 | 4950 | 6062 | - | 4.D.2.1.5 |
| peptidase | Rep_3353_c_31 | Rep_3353_c_31_6 | 6234 | 7532 | - | I04.UPW |
| CAZyme | Rep_3353_c_31 | Rep_3353_c_31_7 | 7538 | 8896 | - | GT28 |
| pfam | Rep_3353_c_31 | Rep_3353_c_31_8 | 9149 | 11107 | + | VanW |
| TC | Rep_3353_c_31 | Rep_3353_c_31_9 | 11288 | 12298 | + | 9.A.11.1.1 |
Gene ID: Rep_3353_c_31_4
Type: CAZyme
Location: 3901 - 4878 (-)
Type: CAZyme
Location: 3901 - 4878 (-)
Gene ID: Rep_3353_c_31_5
Type: TC
Location: 4950 - 6062 (-)
Type: TC
Location: 4950 - 6062 (-)
Gene ID: Rep_3353_c_31_6
Type: peptidase
Location: 6234 - 7532 (-)
Type: peptidase
Location: 6234 - 7532 (-)
Gene ID: Rep_3353_c_31_7
Type: CAZyme
Location: 7538 - 8896 (-)
Type: CAZyme
Location: 7538 - 8896 (-)
Gene ID: Rep_3353_c_31_8
Type: pfam
Location: 9149 - 11107 (+)
Type: pfam
Location: 9149 - 11107 (+)
Gene ID: Rep_3353_c_31_9
Type: TC
Location: 11288 - 12298 (+)
Type: TC
Location: 11288 - 12298 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Scatavimonas
Species
Scatavimonas merdipullorum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.