Cluster: Rep_3353_CGC14
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3353
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3353_c_29 | Rep_3353_c_29_12 | 13371 | 14411 | + | GH179 |
| pfam | Rep_3353_c_29 | Rep_3353_c_29_13 | 14455 | 15411 | + | ADH_N |
| STP | Rep_3353_c_29 | Rep_3353_c_29_14 | 15456 | 17114 | + | B12-binding |
| TC | Rep_3353_c_29 | Rep_3353_c_29_15 | 17129 | 17884 | + | 2.A.102.4.8 |
Gene ID: Rep_3353_c_29_12
Type: CAZyme
Location: 13371 - 14411 (+)
Type: CAZyme
Location: 13371 - 14411 (+)
Gene ID: Rep_3353_c_29_13
Type: pfam
Location: 14455 - 15411 (+)
Type: pfam
Location: 14455 - 15411 (+)
Gene ID: Rep_3353_c_29_14
Type: STP
Location: 15456 - 17114 (+)
Type: STP
Location: 15456 - 17114 (+)
Gene ID: Rep_3353_c_29_15
Type: TC
Location: 17129 - 17884 (+)
Type: TC
Location: 17129 - 17884 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Scatavimonas
Species
Scatavimonas merdipullorum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.