Cluster: Rep_3353_CGC11
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3353
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3353_c_22 | Rep_3353_c_22_105 | 102502 | 103740 | - | GH3 |
| pfam | Rep_3353_c_22 | Rep_3353_c_22_106 | 103836 | 104375 | - | Rubrerythrin | RUBY_RBDX |
| TC | Rep_3353_c_22 | Rep_3353_c_22_107 | 104633 | 106003 | + | 2.A.38.4.3 |
| TC | Rep_3353_c_22 | Rep_3353_c_22_108 | 106110 | 106760 | + | 2.A.38.4.4 |
Gene ID: Rep_3353_c_22_105
Type: CAZyme
Location: 102502 - 103740 (-)
Type: CAZyme
Location: 102502 - 103740 (-)
Gene ID: Rep_3353_c_22_106
Type: pfam
Location: 103836 - 104375 (-)
Type: pfam
Location: 103836 - 104375 (-)
Gene ID: Rep_3353_c_22_107
Type: TC
Location: 104633 - 106003 (+)
Type: TC
Location: 104633 - 106003 (+)
Gene ID: Rep_3353_c_22_108
Type: TC
Location: 106110 - 106760 (+)
Type: TC
Location: 106110 - 106760 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Scatavimonas
Species
Scatavimonas merdipullorum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.