Cluster: Rep_3353_CGC10
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_3353
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3353_c_16 | Rep_3353_c_16_10 | 11779 | 13425 | + | 4.C.1.1.6 |
| CAZyme | Rep_3353_c_16 | Rep_3353_c_16_11 | 13516 | 15267 | + | CBM34 | GH13_20 |
| STP | Rep_3353_c_16 | Rep_3353_c_16_12 | 15417 | 16124 | - | Fer4 | Fer4 |
| TF | Rep_3353_c_16 | Rep_3353_c_16_13 | 16262 | 16954 | + | 0038753 |
| CAZyme | Rep_3353_c_16 | Rep_3353_c_16_14 | 17155 | 20169 | + | GH13_19 |
Gene ID: Rep_3353_c_16_10
Type: TC
Location: 11779 - 13425 (+)
Type: TC
Location: 11779 - 13425 (+)
Gene ID: Rep_3353_c_16_11
Type: CAZyme
Location: 13516 - 15267 (+)
Type: CAZyme
Location: 13516 - 15267 (+)
Gene ID: Rep_3353_c_16_12
Type: STP
Location: 15417 - 16124 (-)
Type: STP
Location: 15417 - 16124 (-)
Gene ID: Rep_3353_c_16_13
Type: TF
Location: 16262 - 16954 (+)
Type: TF
Location: 16262 - 16954 (+)
Gene ID: Rep_3353_c_16_14
Type: CAZyme
Location: 17155 - 20169 (+)
Type: CAZyme
Location: 17155 - 20169 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Scatavimonas
Species
Scatavimonas merdipullorum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.