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Cluster: Rep_3335_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_3335_c_30 Rep_3335_c_30_8 6085 9057 + GH106
TC Rep_3335_c_30 Rep_3335_c_30_9 9211 10539 + 3.D.6.1.2
TC Rep_3335_c_30 Rep_3335_c_30_10 10551 11546 + 3.D.6.1.2
TC Rep_3335_c_30 Rep_3335_c_30_11 11548 12141 + 3.D.6.1.2
TC Rep_3335_c_30 Rep_3335_c_30_12 12131 12751 + 3.D.6.1.2
TC Rep_3335_c_30 Rep_3335_c_30_13 12748 13344 + 3.D.6.1.2
TC Rep_3335_c_30 Rep_3335_c_30_14 13357 14148 + 3.D.6.1.2
Gene ID: Rep_3335_c_30_8
Type: CAZyme
Location: 6085 - 9057 (+)
Gene ID: Rep_3335_c_30_9
Type: TC
Location: 9211 - 10539 (+)
Gene ID: Rep_3335_c_30_10
Type: TC
Location: 10551 - 11546 (+)
Gene ID: Rep_3335_c_30_11
Type: TC
Location: 11548 - 12141 (+)
Gene ID: Rep_3335_c_30_12
Type: TC
Location: 12131 - 12751 (+)
Gene ID: Rep_3335_c_30_13
Type: TC
Location: 12748 - 13344 (+)
Gene ID: Rep_3335_c_30_14
Type: TC
Location: 13357 - 14148 (+)

Taxonomic Lineage

Domain
Bacteria

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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