Cluster: Rep_3335_CGC4
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 4
- Substrate:
- Genome ID: Rep_3335
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3335_c_11 | Rep_3335_c_11_39 | 53808 | 54827 | + | 3.A.1.1.9 |
| TC | Rep_3335_c_11 | Rep_3335_c_11_40 | 54847 | 55752 | + | 3.A.1.1.29 |
| CAZyme | Rep_3335_c_11 | Rep_3335_c_11_41 | 55782 | 57635 | + | PL33_1 |
| CAZyme | Rep_3335_c_11 | Rep_3335_c_11_42 | 57925 | 60351 | + | GH94 |
| pfam | Rep_3335_c_11 | Rep_3335_c_11_43 | 60452 | 61420 | + | Cu_amine_oxidN1 | Cu_amine_oxidN1 |
| pfam | Rep_3335_c_11 | Rep_3335_c_11_44 | 61507 | 63348 | + | Flg_new | Flg_new |
| CAZyme | Rep_3335_c_11 | Rep_3335_c_11_45 | 63638 | 65002 | + | GH26 |
| pfam | Rep_3335_c_11 | Rep_3335_c_11_46 | 65045 | 65710 | - | Ferritin | Mn_catalase |
| TC | Rep_3335_c_11 | Rep_3335_c_11_47 | 66013 | 67323 | - | 9.A.40.2.1 |
| NULL(UNKNOWN) | Rep_3335_c_11 | Rep_3335_c_11_48 | 67373 | 67489 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_3335_c_11 | Rep_3335_c_11_49 | 67698 | 69440 | + | 3.A.1.106.2 |
| CAZyme | Rep_3335_c_11 | Rep_3335_c_11_50 | 70020 | 72464 | - | CBM9 |
Gene ID: Rep_3335_c_11_39
Type: TC
Location: 53808 - 54827 (+)
Type: TC
Location: 53808 - 54827 (+)
Gene ID: Rep_3335_c_11_40
Type: TC
Location: 54847 - 55752 (+)
Type: TC
Location: 54847 - 55752 (+)
Gene ID: Rep_3335_c_11_41
Type: CAZyme
Location: 55782 - 57635 (+)
Type: CAZyme
Location: 55782 - 57635 (+)
Gene ID: Rep_3335_c_11_42
Type: CAZyme
Location: 57925 - 60351 (+)
Type: CAZyme
Location: 57925 - 60351 (+)
Gene ID: Rep_3335_c_11_43
Type: pfam
Location: 60452 - 61420 (+)
Type: pfam
Location: 60452 - 61420 (+)
Gene ID: Rep_3335_c_11_44
Type: pfam
Location: 61507 - 63348 (+)
Type: pfam
Location: 61507 - 63348 (+)
Gene ID: Rep_3335_c_11_45
Type: CAZyme
Location: 63638 - 65002 (+)
Type: CAZyme
Location: 63638 - 65002 (+)
Gene ID: Rep_3335_c_11_46
Type: pfam
Location: 65045 - 65710 (-)
Type: pfam
Location: 65045 - 65710 (-)
Gene ID: Rep_3335_c_11_47
Type: TC
Location: 66013 - 67323 (-)
Type: TC
Location: 66013 - 67323 (-)
Gene ID: Rep_3335_c_11_48
Type:
Location: 67373 - 67489 (-)
Type:
Location: 67373 - 67489 (-)
Gene ID: Rep_3335_c_11_49
Type: TC
Location: 67698 - 69440 (+)
Type: TC
Location: 67698 - 69440 (+)
Gene ID: Rep_3335_c_11_50
Type: CAZyme
Location: 70020 - 72464 (-)
Type: CAZyme
Location: 70020 - 72464 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Monoglobales
Family
Monoglobaceae
Genus
CAJTWN01
Species
CAJTWN01 sp910580105
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.