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Cluster: Rep_3335_CGC25

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_3335_c_107 Rep_3335_c_107_37 38911 40881 + GH3
TC Rep_3335_c_107 Rep_3335_c_107_38 40931 41800 - 2.A.7.2.1
pfam Rep_3335_c_107 Rep_3335_c_107_39 42054 42305 - DUF2325
CAZyme Rep_3335_c_107 Rep_3335_c_107_40 42424 44847 - GH38
Gene ID: Rep_3335_c_107_37
Type: CAZyme
Location: 38911 - 40881 (+)
Gene ID: Rep_3335_c_107_38
Type: TC
Location: 40931 - 41800 (-)
Gene ID: Rep_3335_c_107_39
Type: pfam
Location: 42054 - 42305 (-)
Gene ID: Rep_3335_c_107_40
Type: CAZyme
Location: 42424 - 44847 (-)

Taxonomic Lineage

Domain
Bacteria

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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