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Cluster: Rep_3335_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_3335_c_58 Rep_3335_c_58_5 5291 7642 + GT51
pfam Rep_3335_c_58 Rep_3335_c_58_6 7717 8415 + Polysacc_deac_1
pfam Rep_3335_c_58 Rep_3335_c_58_7 8503 9624 - FtsX | MacB_PCD
TC Rep_3335_c_58 Rep_3335_c_58_8 9723 10412 - 3.A.1.134.12
Gene ID: Rep_3335_c_58_5
Type: CAZyme
Location: 5291 - 7642 (+)
Gene ID: Rep_3335_c_58_6
Type: pfam
Location: 7717 - 8415 (+)
Gene ID: Rep_3335_c_58_7
Type: pfam
Location: 8503 - 9624 (-)
Gene ID: Rep_3335_c_58_8
Type: TC
Location: 9723 - 10412 (-)

Taxonomic Lineage

Domain
Bacteria

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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