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Cluster: Rep_3335_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_3335_c_53 Rep_3335_c_53_26 43351 44961 + 3.A.1.1.9
TC Rep_3335_c_53 Rep_3335_c_53_27 44975 45886 + 3.A.1.1.10
TC Rep_3335_c_53 Rep_3335_c_53_28 45899 46780 + 3.A.1.1.29
CAZyme Rep_3335_c_53 Rep_3335_c_53_29 46925 49903 + GH106
CAZyme Rep_3335_c_53 Rep_3335_c_53_30 49915 50931 + GH130_7
pfam Rep_3335_c_53 Rep_3335_c_53_31 50931 52631 + PGM_PMM_IV | PGM_PMM_I | PGM_PMM_II | PGM_PMM_III
TF Rep_3335_c_53 Rep_3335_c_53_32 52714 53547 + HTH_AraC
CAZyme Rep_3335_c_53 Rep_3335_c_53_33 53686 54675 - GH130_2
Gene ID: Rep_3335_c_53_26
Type: TC
Location: 43351 - 44961 (+)
Gene ID: Rep_3335_c_53_27
Type: TC
Location: 44975 - 45886 (+)
Gene ID: Rep_3335_c_53_28
Type: TC
Location: 45899 - 46780 (+)
Gene ID: Rep_3335_c_53_29
Type: CAZyme
Location: 46925 - 49903 (+)
Gene ID: Rep_3335_c_53_30
Type: CAZyme
Location: 49915 - 50931 (+)
Gene ID: Rep_3335_c_53_31
Type: pfam
Location: 50931 - 52631 (+)
Gene ID: Rep_3335_c_53_32
Type: TF
Location: 52714 - 53547 (+)
Gene ID: Rep_3335_c_53_33
Type: CAZyme
Location: 53686 - 54675 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Monoglobales
→
Family
Monoglobaceae
→
Genus
CAJTWN01
→
Species
CAJTWN01 sp910580105

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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