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Cluster: Rep_3334_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_3334_c_1 Rep_3334_c_1_71 78389 79990 - GH51_1
pfam Rep_3334_c_1 Rep_3334_c_1_72 80254 80826 - PTAC
TC Rep_3334_c_1 Rep_3334_c_1_73 80918 83719 - 9.B.144.1.5
TC Rep_3334_c_1 Rep_3334_c_1_74 83712 84347 - 4.D.2.1.9
CAZyme Rep_3334_c_1 Rep_3334_c_1_75 84340 84648 - GT2
pfam Rep_3334_c_1 Rep_3334_c_1_76 84672 85454 - PHP_C
CAZyme Rep_3334_c_1 Rep_3334_c_1_77 85882 87969 - GH43_26
CAZyme Rep_3334_c_1 Rep_3334_c_1_78 88225 90588 - GH139
CAZyme Rep_3334_c_1 Rep_3334_c_1_79 91089 93188 - GH3
Gene ID: Rep_3334_c_1_71
Type: CAZyme
Location: 78389 - 79990 (-)
Gene ID: Rep_3334_c_1_72
Type: pfam
Location: 80254 - 80826 (-)
Gene ID: Rep_3334_c_1_73
Type: TC
Location: 80918 - 83719 (-)
Gene ID: Rep_3334_c_1_74
Type: TC
Location: 83712 - 84347 (-)
Gene ID: Rep_3334_c_1_75
Type: CAZyme
Location: 84340 - 84648 (-)
Gene ID: Rep_3334_c_1_76
Type: pfam
Location: 84672 - 85454 (-)
Gene ID: Rep_3334_c_1_77
Type: CAZyme
Location: 85882 - 87969 (-)
Gene ID: Rep_3334_c_1_78
Type: CAZyme
Location: 88225 - 90588 (-)
Gene ID: Rep_3334_c_1_79
Type: CAZyme
Location: 91089 - 93188 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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