Cluster: Rep_3334_CGC23
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_3334
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3334_c_50 | Rep_3334_c_50_1 | 21 | 1853 | + | 3.A.3.2.21 |
| TF | Rep_3334_c_50 | Rep_3334_c_50_2 | 1932 | 2783 | - | HTH_AraC | HTH_AraC |
| NULL(UNKNOWN) | Rep_3334_c_50 | Rep_3334_c_50_3 | 2911 | 3300 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_3334_c_50 | Rep_3334_c_50_4 | 3301 | 4779 | + | GH63 |
| CAZyme | Rep_3334_c_50 | Rep_3334_c_50_5 | 4851 | 6188 | + | GH98 |
Gene ID: Rep_3334_c_50_1
Type: TC
Location: 21 - 1853 (+)
Type: TC
Location: 21 - 1853 (+)
Gene ID: Rep_3334_c_50_2
Type: TF
Location: 1932 - 2783 (-)
Type: TF
Location: 1932 - 2783 (-)
Gene ID: Rep_3334_c_50_3
Type:
Location: 2911 - 3300 (+)
Type:
Location: 2911 - 3300 (+)
Gene ID: Rep_3334_c_50_4
Type: CAZyme
Location: 3301 - 4779 (+)
Type: CAZyme
Location: 3301 - 4779 (+)
Gene ID: Rep_3334_c_50_5
Type: CAZyme
Location: 4851 - 6188 (+)
Type: CAZyme
Location: 4851 - 6188 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faeciplasma
Species
Faeciplasma sp002491605
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.