Cluster: Rep_3334_CGC2
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3334
- CGC Family ID: CGCFAM_02263
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3334_c_0 | Rep_3334_c_0_42 | 47748 | 48710 | + | 3.A.1.1.11 |
| TC | Rep_3334_c_0 | Rep_3334_c_0_43 | 48724 | 49911 | + | 3.A.1.1.11 |
| TC | Rep_3334_c_0 | Rep_3334_c_0_44 | 50246 | 50782 | + | 3.A.1.25.5 |
| CAZyme | Rep_3334_c_0 | Rep_3334_c_0_45 | 50779 | 52401 | + | GH26 |
Gene ID: Rep_3334_c_0_42
Type: TC
Location: 47748 - 48710 (+)
Type: TC
Location: 47748 - 48710 (+)
Gene ID: Rep_3334_c_0_43
Type: TC
Location: 48724 - 49911 (+)
Type: TC
Location: 48724 - 49911 (+)
Gene ID: Rep_3334_c_0_44
Type: TC
Location: 50246 - 50782 (+)
Type: TC
Location: 50246 - 50782 (+)
Gene ID: Rep_3334_c_0_45
Type: CAZyme
Location: 50779 - 52401 (+)
Type: CAZyme
Location: 50779 - 52401 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faeciplasma
Species
Faeciplasma sp002491605
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.