Cluster: Rep_3334_CGC19
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: Rep_3334
- CGC Family ID: CGCFAM_10769
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3334_c_20 | Rep_3334_c_20_19 | 20015 | 20836 | - | 3.A.1.132.3 |
| peptidase | Rep_3334_c_20 | Rep_3334_c_20_20 | 20864 | 22015 | - | M15.UPB |
| pfam | Rep_3334_c_20 | Rep_3334_c_20_21 | 22457 | 22645 | - | SASP |
| CAZyme | Rep_3334_c_20 | Rep_3334_c_20_22 | 22915 | 23973 | - | CE2 |
| CAZyme | Rep_3334_c_20 | Rep_3334_c_20_23 | 24062 | 25846 | - | GH43_27 |
| CAZyme | Rep_3334_c_20 | Rep_3334_c_20_24 | 25940 | 27649 | - | GH43_27 |
Gene ID: Rep_3334_c_20_19
Type: TC
Location: 20015 - 20836 (-)
Type: TC
Location: 20015 - 20836 (-)
Gene ID: Rep_3334_c_20_20
Type: peptidase
Location: 20864 - 22015 (-)
Type: peptidase
Location: 20864 - 22015 (-)
Gene ID: Rep_3334_c_20_21
Type: pfam
Location: 22457 - 22645 (-)
Type: pfam
Location: 22457 - 22645 (-)
Gene ID: Rep_3334_c_20_22
Type: CAZyme
Location: 22915 - 23973 (-)
Type: CAZyme
Location: 22915 - 23973 (-)
Gene ID: Rep_3334_c_20_23
Type: CAZyme
Location: 24062 - 25846 (-)
Type: CAZyme
Location: 24062 - 25846 (-)
Gene ID: Rep_3334_c_20_24
Type: CAZyme
Location: 25940 - 27649 (-)
Type: CAZyme
Location: 25940 - 27649 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faeciplasma
Species
Faeciplasma sp002491605
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.