Cluster: Rep_3334_CGC14
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3334
- CGC Family ID: CGCFAM_00766
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3334_c_13 | Rep_3334_c_13_32 | 33135 | 35477 | + | GT51 |
| pfam | Rep_3334_c_13 | Rep_3334_c_13_33 | 35511 | 36629 | + | UPF0020 | THUMP | RlmL_1st |
| TC | Rep_3334_c_13 | Rep_3334_c_13_34 | 36716 | 38548 | + | 2.A.16.2.2 |
Gene ID: Rep_3334_c_13_32
Type: CAZyme
Location: 33135 - 35477 (+)
Type: CAZyme
Location: 33135 - 35477 (+)
Gene ID: Rep_3334_c_13_33
Type: pfam
Location: 35511 - 36629 (+)
Type: pfam
Location: 35511 - 36629 (+)
Gene ID: Rep_3334_c_13_34
Type: TC
Location: 36716 - 38548 (+)
Type: TC
Location: 36716 - 38548 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faeciplasma
Species
Faeciplasma sp002491605
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.