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Cluster: Rep_3334_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_3334_c_12 Rep_3334_c_12_15 15752 17179 - GH43_35
pfam Rep_3334_c_12 Rep_3334_c_12_16 17362 17958 - ECF_trnsprt
pfam Rep_3334_c_12 Rep_3334_c_12_17 18066 18842 - Pan_kinase
TC Rep_3334_c_12 Rep_3334_c_12_18 19043 20236 - 2.A.37.2.2
pfam Rep_3334_c_12 Rep_3334_c_12_19 20480 21553 + Methyltransf_21
peptidase Rep_3334_c_12 Rep_3334_c_12_20 21961 22689 + C40.006
TC Rep_3334_c_12 Rep_3334_c_12_21 23107 23706 + 2.A.88.3.2
TC Rep_3334_c_12 Rep_3334_c_12_22 24050 25414 - 2.A.66.1.13
pfam Rep_3334_c_12 Rep_3334_c_12_23 25401 26123 - Metallophos
peptidase Rep_3334_c_12 Rep_3334_c_12_24 26433 27797 + S11.UPW
CAZyme Rep_3334_c_12 Rep_3334_c_12_25 27894 35024 - GH94 | GT84
pfam Rep_3334_c_12 Rep_3334_c_12_26 35451 36662 + Metalloenzyme | PhosphMutase
CAZyme Rep_3334_c_12 Rep_3334_c_12_27 36805 38436 - GH9
TC Rep_3334_c_12 Rep_3334_c_12_28 38487 39482 - 8.A.5.1.6
Gene ID: Rep_3334_c_12_15
Type: CAZyme
Location: 15752 - 17179 (-)
Gene ID: Rep_3334_c_12_16
Type: pfam
Location: 17362 - 17958 (-)
Gene ID: Rep_3334_c_12_17
Type: pfam
Location: 18066 - 18842 (-)
Gene ID: Rep_3334_c_12_18
Type: TC
Location: 19043 - 20236 (-)
Gene ID: Rep_3334_c_12_19
Type: pfam
Location: 20480 - 21553 (+)
Gene ID: Rep_3334_c_12_20
Type: peptidase
Location: 21961 - 22689 (+)
Gene ID: Rep_3334_c_12_21
Type: TC
Location: 23107 - 23706 (+)
Gene ID: Rep_3334_c_12_22
Type: TC
Location: 24050 - 25414 (-)
Gene ID: Rep_3334_c_12_23
Type: pfam
Location: 25401 - 26123 (-)
Gene ID: Rep_3334_c_12_24
Type: peptidase
Location: 26433 - 27797 (+)
Gene ID: Rep_3334_c_12_25
Type: CAZyme
Location: 27894 - 35024 (-)
Gene ID: Rep_3334_c_12_26
Type: pfam
Location: 35451 - 36662 (+)
Gene ID: Rep_3334_c_12_27
Type: CAZyme
Location: 36805 - 38436 (-)
Gene ID: Rep_3334_c_12_28
Type: TC
Location: 38487 - 39482 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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