Cluster: Rep_3334_CGC12
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3334
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3334_c_7 | Rep_3334_c_7_11 | 7925 | 8614 | - | 9.B.149.1.11 |
| pfam | Rep_3334_c_7 | Rep_3334_c_7_12 | 8976 | 9161 | + | Ribosomal_L28 |
| TC | Rep_3334_c_7 | Rep_3334_c_7_13 | 9439 | 10797 | + | 2.A.38.1.1 |
| TC | Rep_3334_c_7 | Rep_3334_c_7_14 | 10832 | 12274 | + | 2.A.38.1.1 |
| CAZyme | Rep_3334_c_7 | Rep_3334_c_7_15 | 12321 | 13856 | + | GH13_44 |
Gene ID: Rep_3334_c_7_11
Type: TC
Location: 7925 - 8614 (-)
Type: TC
Location: 7925 - 8614 (-)
Gene ID: Rep_3334_c_7_12
Type: pfam
Location: 8976 - 9161 (+)
Type: pfam
Location: 8976 - 9161 (+)
Gene ID: Rep_3334_c_7_13
Type: TC
Location: 9439 - 10797 (+)
Type: TC
Location: 9439 - 10797 (+)
Gene ID: Rep_3334_c_7_14
Type: TC
Location: 10832 - 12274 (+)
Type: TC
Location: 10832 - 12274 (+)
Gene ID: Rep_3334_c_7_15
Type: CAZyme
Location: 12321 - 13856 (+)
Type: CAZyme
Location: 12321 - 13856 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faeciplasma
Species
Faeciplasma sp002491605
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.