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Cluster: Rep_3334_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_3334_c_5 Rep_3334_c_5_31 30922 31464 - 1.A.16.5.2
pfam Rep_3334_c_5 Rep_3334_c_5_32 31815 32528 - Flavodoxin_2 | FMN_red
TC Rep_3334_c_5 Rep_3334_c_5_33 32738 34534 + 3.A.1.106.8
TC Rep_3334_c_5 Rep_3334_c_5_34 34527 36419 + 3.A.1.135.5
pfam Rep_3334_c_5 Rep_3334_c_5_35 36568 37329 + DUF6709
pfam Rep_3334_c_5 Rep_3334_c_5_36 37437 38066 - DUF1287
TC Rep_3334_c_5 Rep_3334_c_5_37 38234 39541 - 2.A.1.2.88
CAZyme Rep_3334_c_5 Rep_3334_c_5_38 39692 41323 - GH30
Gene ID: Rep_3334_c_5_31
Type: TC
Location: 30922 - 31464 (-)
Gene ID: Rep_3334_c_5_32
Type: pfam
Location: 31815 - 32528 (-)
Gene ID: Rep_3334_c_5_33
Type: TC
Location: 32738 - 34534 (+)
Gene ID: Rep_3334_c_5_34
Type: TC
Location: 34527 - 36419 (+)
Gene ID: Rep_3334_c_5_35
Type: pfam
Location: 36568 - 37329 (+)
Gene ID: Rep_3334_c_5_36
Type: pfam
Location: 37437 - 38066 (-)
Gene ID: Rep_3334_c_5_37
Type: TC
Location: 38234 - 39541 (-)
Gene ID: Rep_3334_c_5_38
Type: CAZyme
Location: 39692 - 41323 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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