Cluster: Rep_3334_CGC1
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3334
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3334_c_0 | Rep_3334_c_0_21 | 18778 | 20514 | + | 3.A.1.135.5 |
| TC | Rep_3334_c_0 | Rep_3334_c_0_22 | 20537 | 22273 | + | 3.A.1.135.5 |
| pfam | Rep_3334_c_0 | Rep_3334_c_0_23 | 22420 | 22878 | + | DUF4830 |
| pfam | Rep_3334_c_0 | Rep_3334_c_0_24 | 22904 | 23620 | + | PseudoU_synth_2 | S4 |
| TC | Rep_3334_c_0 | Rep_3334_c_0_25 | 23778 | 24920 | + | 3.A.1.1.26 |
| CAZyme | Rep_3334_c_0 | Rep_3334_c_0_26 | 25008 | 26240 | + | CE17 |
Gene ID: Rep_3334_c_0_21
Type: TC
Location: 18778 - 20514 (+)
Type: TC
Location: 18778 - 20514 (+)
Gene ID: Rep_3334_c_0_22
Type: TC
Location: 20537 - 22273 (+)
Type: TC
Location: 20537 - 22273 (+)
Gene ID: Rep_3334_c_0_23
Type: pfam
Location: 22420 - 22878 (+)
Type: pfam
Location: 22420 - 22878 (+)
Gene ID: Rep_3334_c_0_24
Type: pfam
Location: 22904 - 23620 (+)
Type: pfam
Location: 22904 - 23620 (+)
Gene ID: Rep_3334_c_0_25
Type: TC
Location: 23778 - 24920 (+)
Type: TC
Location: 23778 - 24920 (+)
Gene ID: Rep_3334_c_0_26
Type: CAZyme
Location: 25008 - 26240 (+)
Type: CAZyme
Location: 25008 - 26240 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faeciplasma
Species
Faeciplasma sp002491605
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.