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Cluster: Rep_332_CGC23

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_332_c_129 Rep_332_c_129_14 12755 14173 + GH23
pfam Rep_332_c_129 Rep_332_c_129_15 14302 14847 + DUF3332
pfam Rep_332_c_129 Rep_332_c_129_16 14851 15537 + His_Phos_1 | His_Phos_1
TC Rep_332_c_129 Rep_332_c_129_17 15617 16915 - 3.D.5.1.1
TC Rep_332_c_129 Rep_332_c_129_18 16920 17537 - 3.D.5.1.1
TC Rep_332_c_129 Rep_332_c_129_19 17561 18187 - 3.D.5.1.1
TC Rep_332_c_129 Rep_332_c_129_20 18196 18903 - 3.D.5.1.1
TC Rep_332_c_129 Rep_332_c_129_21 18929 20119 - 3.D.5.1.1
pfam Rep_332_c_129 Rep_332_c_129_22 20138 21487 - NQRA_N | NQRA_SLBB | NQRA_2nd
TC Rep_332_c_129 Rep_332_c_129_23 21838 22677 + 1.A.30.3.1
Gene ID: Rep_332_c_129_14
Type: CAZyme
Location: 12755 - 14173 (+)
Gene ID: Rep_332_c_129_15
Type: pfam
Location: 14302 - 14847 (+)
Gene ID: Rep_332_c_129_16
Type: pfam
Location: 14851 - 15537 (+)
Gene ID: Rep_332_c_129_17
Type: TC
Location: 15617 - 16915 (-)
Gene ID: Rep_332_c_129_18
Type: TC
Location: 16920 - 17537 (-)
Gene ID: Rep_332_c_129_19
Type: TC
Location: 17561 - 18187 (-)
Gene ID: Rep_332_c_129_20
Type: TC
Location: 18196 - 18903 (-)
Gene ID: Rep_332_c_129_21
Type: TC
Location: 18929 - 20119 (-)
Gene ID: Rep_332_c_129_22
Type: pfam
Location: 20138 - 21487 (-)
Gene ID: Rep_332_c_129_23
Type: TC
Location: 21838 - 22677 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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