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Cluster: Rep_332_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_332_c_77 Rep_332_c_77_2 1273 1935 - 3.A.1.140.1
TC Rep_332_c_77 Rep_332_c_77_3 1947 4130 - 2.A.16.2.2
STP Rep_332_c_77 Rep_332_c_77_4 4229 5500 - AAA
peptidase Rep_332_c_77 Rep_332_c_77_5 5518 6192 - S14.UPW
CAZyme Rep_332_c_77 Rep_332_c_77_6 6273 8513 - GH92
pfam Rep_332_c_77 Rep_332_c_77_7 9072 11030 + Metallophos | MetallophosC | MetallophosN
TC Rep_332_c_77 Rep_332_c_77_8 11211 14606 + 1.B.14.6.1
TC Rep_332_c_77 Rep_332_c_77_9 14627 16447 + 8.A.46.1.4
Gene ID: Rep_332_c_77_2
Type: TC
Location: 1273 - 1935 (-)
Gene ID: Rep_332_c_77_3
Type: TC
Location: 1947 - 4130 (-)
Gene ID: Rep_332_c_77_4
Type: STP
Location: 4229 - 5500 (-)
Gene ID: Rep_332_c_77_5
Type: peptidase
Location: 5518 - 6192 (-)
Gene ID: Rep_332_c_77_6
Type: CAZyme
Location: 6273 - 8513 (-)
Gene ID: Rep_332_c_77_7
Type: pfam
Location: 9072 - 11030 (+)
Gene ID: Rep_332_c_77_8
Type: TC
Location: 11211 - 14606 (+)
Gene ID: Rep_332_c_77_9
Type: TC
Location: 14627 - 16447 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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