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Cluster: Rep_332_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_332_c_57 Rep_332_c_57_1 3 1181 + GH136
CAZyme Rep_332_c_57 Rep_332_c_57_2 1372 2109 + GH16_3
pfam Rep_332_c_57 Rep_332_c_57_3 2512 4011 + DDE_Tnp_1
TC Rep_332_c_57 Rep_332_c_57_4 4024 7005 + 1.B.14.6.1
Gene ID: Rep_332_c_57_1
Type: CAZyme
Location: 3 - 1181 (+)
Gene ID: Rep_332_c_57_2
Type: CAZyme
Location: 1372 - 2109 (+)
Gene ID: Rep_332_c_57_3
Type: pfam
Location: 2512 - 4011 (+)
Gene ID: Rep_332_c_57_4
Type: TC
Location: 4024 - 7005 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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