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Cluster: Rep_3328_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_3328_c_21 Rep_3328_c_21_7 4524 5867 + 2.A.38.4.1
TC Rep_3328_c_21 Rep_3328_c_21_8 5903 6550 + 2.A.38.4.6
TF Rep_3328_c_21 Rep_3328_c_21_9 7127 7564 + MarR
TC Rep_3328_c_21 Rep_3328_c_21_10 7561 9288 + 3.A.1.135.7
TC Rep_3328_c_21 Rep_3328_c_21_11 9281 11110 + 3.A.1.135.5
TF Rep_3328_c_21 Rep_3328_c_21_12 11154 11999 - HTH_AraC | HTH_AraC
CAZyme Rep_3328_c_21 Rep_3328_c_21_13 12100 14349 + GH95
pfam Rep_3328_c_21 Rep_3328_c_21_14 14489 16273 + Fucose_iso_C | Fucose_iso_N1 | Fucose_iso_N2
NULL(UNKNOWN) Rep_3328_c_21 Rep_3328_c_21_15 16317 18455 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_3328_c_21 Rep_3328_c_21_16 18452 20269 + GH140 | GH140
Gene ID: Rep_3328_c_21_7
Type: TC
Location: 4524 - 5867 (+)
Gene ID: Rep_3328_c_21_8
Type: TC
Location: 5903 - 6550 (+)
Gene ID: Rep_3328_c_21_9
Type: TF
Location: 7127 - 7564 (+)
Gene ID: Rep_3328_c_21_10
Type: TC
Location: 7561 - 9288 (+)
Gene ID: Rep_3328_c_21_11
Type: TC
Location: 9281 - 11110 (+)
Gene ID: Rep_3328_c_21_12
Type: TF
Location: 11154 - 11999 (-)
Gene ID: Rep_3328_c_21_13
Type: CAZyme
Location: 12100 - 14349 (+)
Gene ID: Rep_3328_c_21_14
Type: pfam
Location: 14489 - 16273 (+)
Gene ID: Rep_3328_c_21_15
Type:
Location: 16317 - 18455 (+)
Gene ID: Rep_3328_c_21_16
Type: CAZyme
Location: 18452 - 20269 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Christensenellales
→
Family
QALW01
→
Genus
UMGS1322
→
Species
UMGS1322 sp905200615

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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