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Cluster: Rep_3328_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_3328_c_20 Rep_3328_c_20_18 17287 18123 + CE4
pfam Rep_3328_c_20 Rep_3328_c_20_19 18355 18993 - His_Phos_1
pfam Rep_3328_c_20 Rep_3328_c_20_20 19130 19666 + DUF436
TC Rep_3328_c_20 Rep_3328_c_20_21 19727 21643 + 3.A.1.111.2
Gene ID: Rep_3328_c_20_18
Type: CAZyme
Location: 17287 - 18123 (+)
Gene ID: Rep_3328_c_20_19
Type: pfam
Location: 18355 - 18993 (-)
Gene ID: Rep_3328_c_20_20
Type: pfam
Location: 19130 - 19666 (+)
Gene ID: Rep_3328_c_20_21
Type: TC
Location: 19727 - 21643 (+)

Taxonomic Lineage

Domain
Bacteria
Family
QALW01

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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