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Cluster: Rep_3328_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_3328_c_10 Rep_3328_c_10_15 15853 16800 + GT2
pfam Rep_3328_c_10 Rep_3328_c_10_16 16813 19158 + MutS_V | Smr | MSSS
TF Rep_3328_c_10 Rep_3328_c_10_17 19265 19954 + Trans_reg_C
TC Rep_3328_c_10 Rep_3328_c_10_18 19951 21402 + 2.A.21.9.1
TC Rep_3328_c_10 Rep_3328_c_10_19 21409 22545 + 9.B.160.1.10
CAZyme Rep_3328_c_10 Rep_3328_c_10_20 22652 25081 + GH3
NULL(UNKNOWN) Rep_3328_c_10 Rep_3328_c_10_21 25196 26857 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_3328_c_10 Rep_3328_c_10_22 26969 29233 + GT51
TF Rep_3328_c_10 Rep_3328_c_10_23 29289 30218 + 0037176
TC Rep_3328_c_10 Rep_3328_c_10_24 30227 31417 + 9.B.174.1.1
Gene ID: Rep_3328_c_10_15
Type: CAZyme
Location: 15853 - 16800 (+)
Gene ID: Rep_3328_c_10_16
Type: pfam
Location: 16813 - 19158 (+)
Gene ID: Rep_3328_c_10_17
Type: TF
Location: 19265 - 19954 (+)
Gene ID: Rep_3328_c_10_18
Type: TC
Location: 19951 - 21402 (+)
Gene ID: Rep_3328_c_10_19
Type: TC
Location: 21409 - 22545 (+)
Gene ID: Rep_3328_c_10_20
Type: CAZyme
Location: 22652 - 25081 (+)
Gene ID: Rep_3328_c_10_21
Type:
Location: 25196 - 26857 (-)
Gene ID: Rep_3328_c_10_22
Type: CAZyme
Location: 26969 - 29233 (+)
Gene ID: Rep_3328_c_10_23
Type: TF
Location: 29289 - 30218 (+)
Gene ID: Rep_3328_c_10_24
Type: TC
Location: 30227 - 31417 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Christensenellales
→
Family
QALW01
→
Genus
UMGS1322
→
Species
UMGS1322 sp905200615

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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