Cluster: Rep_3321_CGC8
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3321
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3321_c_13 | Rep_3321_c_13_10 | 11193 | 12248 | + | 9.B.10.1.1 |
| pfam | Rep_3321_c_13 | Rep_3321_c_13_11 | 12276 | 13220 | + | cobW | DUF1980_C |
| CAZyme | Rep_3321_c_13 | Rep_3321_c_13_12 | 13349 | 14074 | - | GT2 |
Gene ID: Rep_3321_c_13_10
Type: TC
Location: 11193 - 12248 (+)
Type: TC
Location: 11193 - 12248 (+)
Gene ID: Rep_3321_c_13_11
Type: pfam
Location: 12276 - 13220 (+)
Type: pfam
Location: 12276 - 13220 (+)
Gene ID: Rep_3321_c_13_12
Type: CAZyme
Location: 13349 - 14074 (-)
Type: CAZyme
Location: 13349 - 14074 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
CAG-272
Genus
Avispirillum
Species
Avispirillum faecium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.