Cluster: Rep_3321_CGC6
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3321
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3321_c_9 | Rep_3321_c_9_3 | 1619 | 2512 | + | 3.A.1.1.18 |
| TC | Rep_3321_c_9 | Rep_3321_c_9_4 | 2534 | 3391 | + | 3.A.1.1.18 |
| CAZyme | Rep_3321_c_9 | Rep_3321_c_9_5 | 3415 | 5589 | + | GH112 |
Gene ID: Rep_3321_c_9_3
Type: TC
Location: 1619 - 2512 (+)
Type: TC
Location: 1619 - 2512 (+)
Gene ID: Rep_3321_c_9_4
Type: TC
Location: 2534 - 3391 (+)
Type: TC
Location: 2534 - 3391 (+)
Gene ID: Rep_3321_c_9_5
Type: CAZyme
Location: 3415 - 5589 (+)
Type: CAZyme
Location: 3415 - 5589 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
CAG-272
Genus
Avispirillum
Species
Avispirillum faecium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.