Cluster: Rep_3321_CGC4
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3321
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3321_c_5 | Rep_3321_c_5_31 | 29153 | 30292 | - | GH27 |
| pfam | Rep_3321_c_5 | Rep_3321_c_5_32 | 30318 | 32267 | - | CN_hydrolase | NAD_synthase |
| TC | Rep_3321_c_5 | Rep_3321_c_5_33 | 32280 | 33656 | - | 1.A.26.1.2 |
Gene ID: Rep_3321_c_5_31
Type: CAZyme
Location: 29153 - 30292 (-)
Type: CAZyme
Location: 29153 - 30292 (-)
Gene ID: Rep_3321_c_5_32
Type: pfam
Location: 30318 - 32267 (-)
Type: pfam
Location: 30318 - 32267 (-)
Gene ID: Rep_3321_c_5_33
Type: TC
Location: 32280 - 33656 (-)
Type: TC
Location: 32280 - 33656 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
CAG-272
Genus
Avispirillum
Species
Avispirillum faecium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.