Cluster: Rep_3321_CGC2
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_3321
- CGC Family ID: CGCFAM_01736
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3321_c_2 | Rep_3321_c_2_71 | 72627 | 73256 | - | 3.D.6.1.1 |
| pfam | Rep_3321_c_2 | Rep_3321_c_2_72 | 73289 | 74407 | - | FMN_bind |
| TC | Rep_3321_c_2 | Rep_3321_c_2_73 | 74432 | 75445 | - | 3.D.6.1.2 |
| TC | Rep_3321_c_2 | Rep_3321_c_2_74 | 75442 | 76791 | - | 3.D.6.1.2 |
| CAZyme | Rep_3321_c_2 | Rep_3321_c_2_75 | 76797 | 78218 | - | GH43_28 |
| CAZyme | Rep_3321_c_2 | Rep_3321_c_2_76 | 78314 | 79726 | - | GH43_28 |
Gene ID: Rep_3321_c_2_71
Type: TC
Location: 72627 - 73256 (-)
Type: TC
Location: 72627 - 73256 (-)
Gene ID: Rep_3321_c_2_72
Type: pfam
Location: 73289 - 74407 (-)
Type: pfam
Location: 73289 - 74407 (-)
Gene ID: Rep_3321_c_2_73
Type: TC
Location: 74432 - 75445 (-)
Type: TC
Location: 74432 - 75445 (-)
Gene ID: Rep_3321_c_2_74
Type: TC
Location: 75442 - 76791 (-)
Type: TC
Location: 75442 - 76791 (-)
Gene ID: Rep_3321_c_2_75
Type: CAZyme
Location: 76797 - 78218 (-)
Type: CAZyme
Location: 76797 - 78218 (-)
Gene ID: Rep_3321_c_2_76
Type: CAZyme
Location: 78314 - 79726 (-)
Type: CAZyme
Location: 78314 - 79726 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
CAG-272
Genus
Avispirillum
Species
Avispirillum faecium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.