Cluster: Rep_3321_CGC13
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3321
- CGC Family ID: CGCFAM_03868
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3321_c_34 | Rep_3321_c_34_5 | 4251 | 5030 | - | GT26 |
| pfam | Rep_3321_c_34 | Rep_3321_c_34_6 | 5100 | 5327 | - | PP-binding |
| TC | Rep_3321_c_34 | Rep_3321_c_34_7 | 5352 | 7058 | - | 4.C.1.1.14 |
Gene ID: Rep_3321_c_34_5
Type: CAZyme
Location: 4251 - 5030 (-)
Type: CAZyme
Location: 4251 - 5030 (-)
Gene ID: Rep_3321_c_34_6
Type: pfam
Location: 5100 - 5327 (-)
Type: pfam
Location: 5100 - 5327 (-)
Gene ID: Rep_3321_c_34_7
Type: TC
Location: 5352 - 7058 (-)
Type: TC
Location: 5352 - 7058 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
CAG-272
Genus
Avispirillum
Species
Avispirillum faecium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.