Cluster: Rep_3321_CGC11
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3321
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3321_c_17 | Rep_3321_c_17_20 | 21179 | 22294 | - | GT28 |
| TC | Rep_3321_c_17 | Rep_3321_c_17_21 | 22316 | 23674 | - | 2.A.103.1.3 |
| TC | Rep_3321_c_17 | Rep_3321_c_17_22 | 23701 | 24699 | - | 9.B.146.1.3 |
Gene ID: Rep_3321_c_17_20
Type: CAZyme
Location: 21179 - 22294 (-)
Type: CAZyme
Location: 21179 - 22294 (-)
Gene ID: Rep_3321_c_17_21
Type: TC
Location: 22316 - 23674 (-)
Type: TC
Location: 22316 - 23674 (-)
Gene ID: Rep_3321_c_17_22
Type: TC
Location: 23701 - 24699 (-)
Type: TC
Location: 23701 - 24699 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
CAG-272
Genus
Avispirillum
Species
Avispirillum faecium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.